| Protein name |
Integral membrane protein
|
| Main knot |
52 (55%)
|
| Global pLDDT |
82.98
|
| Species |
Acidobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6N8WMK1
|
| PDB structures |
-
|
| Model length |
336
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
85.5 | 24-237 | 214 | 1-23, 238-336 | 23 | 99 |
|
Model Sequence |
MITLKNDRLEFRFPEVHRDARCTIEFQRTLRIPDDDSDYPLPPGLGRFPLRHIDDFARRLPEQWGRRGGVIAPMHQAEALWIAFGGHSEYPFAVKIATGKICAISGNPWVDHLNKDPQDFVVLPEQPWLDGYCVEKGVIRQFVAMPLGKGYTAEEQLTGAAQHGGLQIVVYPMKRKRYKQLMARYSRRDHRPDVLYCTSPEPMGLAPGGRMRQEVYDDPYGLDAWDRKHSKRCFVTIANSTQWMAISGERPPTLPPSARHYTEAGLPWFEWYGGDAVAVDGAKKLEKLATVAQLGKKKGEQALLENESVEVTRVVGLSAEGITLDREFTSDEILRS
|
| Protein name |
Integral membrane protein
|
| Main knot |
75 (43%)
|
| Global pLDDT |
69.54
|
| Species |
Acidobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
336
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
82.9 | 22-235 | 214 | 1-21, 236-336 | 21 | 101 |
|
Model Sequence |
MITLKNDRLEFRFPEVHRDARCTIEFQRTLRIPDDDSDYPLPPGLGRFPLRHIDDFARRLPEQWGRRGGVIAPMHQAEALWIAFGGHSEYPFAVKIATGKICAISGNPWVDHLNKDPQDFVVLPEQPWLDGYCVEKGVIRQFVAMPLGKGYTAEEQLTGAAQHGGLQIVVYPMKRKRYKQLMARYSRRDHRPDVLYCTSPEPMGLAPGGRMRQEVYDDPYGLDAWDRKHSKRCFVTIANSTQWMAISGERPPTLPPSARHYTEAGLPWFEWYGGDAVAVDGAKKLEKLATVAQLGKKKGEQALLENESVEVTRVVGLSAEGITLDREFTSDEILRS
|
| Domain |
Bacteria
|
| Family |
unclassified Acidobacteria
|
| Species (Full Name) |
Acidobacteria bacterium
|
| Gene |
F4Z21_06575
|
| PDB structures (whole Protein) |
-
|
A0A6N8WMK1