A0A6N8ZK49 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (70%)
Global pLDDT	83.96
Species	Gammaproteobacteria bacterium
UniProt	A0A6N8ZK49
Structure Prediction Model	AlphaFold v4: A0A6N8ZK49
PDB structures	-
Model length	279
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.2	22-254	233	1-21, 255-279	21	25

Model Sequence

MQVQERHMGLFGATILGVGAIVGGGILALAGTAFSVAGPSAMVSFALNGGIALLTAASFARLARRFPESGGTYTYAKNVFSIELAFVVGWVVWFASIVAGVLYALGFAAFFMEGLLRALPQLAETRVGGDTARLAAAAIAIGAYMLALVRRAAGGGTAETIGKVVVFAVVIAGGAWAWATGSPGELADRLNPFFTEGAGGVVRAMGYTFIALQGFDLIAAVGGEVREPQRTLPRAMYLSLGIALALYLPMLFLFATVGTPAGAGAGSFTHMTLPRLVRG

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (58%)
Global pLDDT	87.31
Species	Gammaproteobacteria bacterium
UniProt	A0A6N8ZK49
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	279
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.1	22-254	233	1-21, 255-279	21	25

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Gammaproteobacteria
Species (Full Name)	Gammaproteobacteria bacterium
Gene	F4X47_11845
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A6N8ZK49F1

AF4

Model Sequence

ESM1

Model Sequence