A0A6P1ABM7F1

PAS domain S-box protein
AF6
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
88 (80%)
Global pLDDT
72.1
Species
Kamptonema sp
UniProt
Structure Prediction Model
AlphaFold v6:  A0A6P1ABM7
PDB structures
-
Model length
1019
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.58 209-796 588 1-208, 797-1019 208 223 Knot
Model Sequence
MSKPRRTVLVANDPSESNDSYEDQLQQDVTFAYQILTETDNARTFALCRSQQLDGILLEFNPPYSEKQEFLSQLKAEMGENCPPIIAIGSNDIKIAVWTLKNGAADYLIKDEITPNDLRLAMRKAIENAELRTSIEQDRAARQASQKRNLELAEAIPEIVWTGEATGLINYWNQRWYEYTGLSEAESMGLAGASIIHPNERDRTLEKWHQAIATGEKFEIEYRLRRWDGIYHWFICRGLPTRDSQGEITGWIGTITDIDQIEQSEIQISRREQQIRRVLDSLFIFVGVMTPSGVLIEANQPALTAASLQPADVVGKPFEETYWWAYDRQIQSQLRDAIERAAKGEIIRYDVKVRLGENQFLIIDFALVPLFDQTGRVEYLIPSGIDISDRLQSEALLRESQAQLQQQLAEIEAIYQTAPIGLNVLDRDLRFVRINQHLAKINGLNVEAHLGRTVRELLPDIADTVEELLHFILETGEPLLNIEISGETPAQPGVKRTWLEQFIPLKNGDRVIGISTVCEEITERKQVEEALRQSEERFRNMADNAPMMIWVTDPTGYCIYLSKSWYEFTGQTETTGLGFGWLDALHPDDYNSSREIFFQANKDRQAFQIEYRLRHQNGEYRWAIDAASPWFSEDGEFKGYIGSVVDISDRKQMEAILRESEERFRTLADNISQFAWMADENGWIFWYNQRWFDYTGTTLEQMQGWGWQQVHHPDRVEQVVEKISYCFKTGEIWEDTFRLRGKDGQYRWFLSRALPIRDEAGNILRWFGTNTDITELRETEIALQQTTERLNIALKSAPITLFNQDLALRYTWIYNPTFSFLEQEIIGKQDADLVSPESAAYLTQLKQQVLDTGIGLRKEVKITQDGKTAYYDLTIDPIRDSQNALVGITCAAVDINDRKQAEEALRQSEDRLRMAVESAQLGTWDWNLTSNELVWDACCKAMFGLPPEAEINIEKFFQALHPDDRDRTEEVMQNSLKRASGGQYDIEYRTIGIQDGVERWIAARGQVYFHGNGKPIRFV
Comments
AF4
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
88 (80%)
Global pLDDT
72.5
Species
Kamptonema sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6P1ABM7
PDB structures
-
Model length
1019
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.5 207-800 594 1-206, 801-1019 206 219
Model Sequence
MSKPRRTVLVANDPSESNDSYEDQLQQDVTFAYQILTETDNARTFALCRSQQLDGILLEFNPPYSEKQEFLSQLKAEMGENCPPIIAIGSNDIKIAVWTLKNGAADYLIKDEITPNDLRLAMRKAIENAELRTSIEQDRAARQASQKRNLELAEAIPEIVWTGEATGLINYWNQRWYEYTGLSEAESMGLAGASIIHPNERDRTLEKWHQAIATGEKFEIEYRLRRWDGIYHWFICRGLPTRDSQGEITGWIGTITDIDQIEQSEIQISRREQQIRRVLDSLFIFVGVMTPSGVLIEANQPALTAASLQPADVVGKPFEETYWWAYDRQIQSQLRDAIERAAKGEIIRYDVKVRLGENQFLIIDFALVPLFDQTGRVEYLIPSGIDISDRLQSEALLRESQAQLQQQLAEIEAIYQTAPIGLNVLDRDLRFVRINQHLAKINGLNVEAHLGRTVRELLPDIADTVEELLHFILETGEPLLNIEISGETPAQPGVKRTWLEQFIPLKNGDRVIGISTVCEEITERKQVEEALRQSEERFRNMADNAPMMIWVTDPTGYCIYLSKSWYEFTGQTETTGLGFGWLDALHPDDYNSSREIFFQANKDRQAFQIEYRLRHQNGEYRWAIDAASPWFSEDGEFKGYIGSVVDISDRKQMEAILRESEERFRTLADNISQFAWMADENGWIFWYNQRWFDYTGTTLEQMQGWGWQQVHHPDRVEQVVEKISYCFKTGEIWEDTFRLRGKDGQYRWFLSRALPIRDEAGNILRWFGTNTDITELRETEIALQQTTERLNIALKSAPITLFNQDLALRYTWIYNPTFSFLEQEIIGKQDADLVSPESAAYLTQLKQQVLDTGIGLRKEVKITQDGKTAYYDLTIDPIRDSQNALVGITCAAVDINDRKQAEEALRQSEDRLRMAVESAQLGTWDWNLTSNELVWDACCKAMFGLPPEAEINIEKFFQALHPDDRDRTEEVMQNSLKRASGGQYDIEYRTIGIQDGVERWIAARGQVYFHGNGKPIRFV
Comments
Domain Bacteria
Family Microcoleaceae
Species (Full Name) Kamptonema sp. SIO1D9
Gene F6K45_14030
PFAM codes  PF08447,  PF08448
InterPro codes  IPR000014,  IPR000700,  IPR001610,  IPR001789,  IPR011006,  IPR013655,  IPR013656,  IPR035965
PDB structures (whole Protein) -
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