A0A6P3WDG8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (78%)
Global pLDDT	96.66
Species	Atlantic herring
UniProt	A0A6P3WDG8
Structure Prediction Model	AlphaFold v4: A0A6P3WDG8
PDB structures	-
Model length	394
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.5	32-285	254	1-31, 286-394	31	109

Model Sequence

MSNSMDGLIDMSDDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRANVDYQKVVRDAIKQIGYDNSDKGFDYKTCNVLVALEQQSPDIAQGVHIDRHEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKMAELRRDGTVPWLRPDSKTQVTVHYKQEKGAVIPQRVHTVVVSVQHDDNISLEDQKKILKEKVIKAVVPAKYLDEHTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISVFTYGSSQKSEQELLHIVNKNFDLRPGVIVRDLNMKRPIYQKTACYGHFGRSEFAWEVPKALKF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (70%)
Global pLDDT	83.26
Species	Atlantic herring
UniProt	A0A6P3WDG8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	394
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					76.3	25-289	265	1-24, 290-394	24	105

Model Sequence

Comments

Domain	Eukaryota
Family	Clupeidae
Species (Full Name)	Clupea harengus (Atlantic herring)
Gene	LOC105911600
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A6P3WDG8F1

AF4

Model Sequence

ESM1

Model Sequence