A0A6P3WF85 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (96%)
Global pLDDT	73.71
Species	Atlantic herring
UniProt	A0A6P3WF85
Structure Prediction Model	AlphaFold v4: A0A6P3WF85
PDB structures	-
Model length	341
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.8	217-263	47	1-216, 264-341	216	78

Model Sequence

MADGVGSFRSTHSALFDYVISVTRELAWQDCQEQVDRKRMSGDTQKELSATFDSNGVSEEKHDSPGSESETLSKRQRKRLAKAQQWEEQRELRKRKRKEKKQKKREERLTQGDEGAELTSRKRLCREAEPSSLRLVVDCSFDSLMAVKDVRKLHKQIQRCYAENRRASHPVQFYLTSLGGQLKQNMDDRDQGWVNWKDIHVKPEHFQEVMRKEELVYLTSDSPNMLKELDESKAYVIGGLVDHNHHKGITFERAQELGINHAQFPLGDFVKMNSRKVLAVNHVFEIVLAYLEKRDWREAFFTVLPQRKGAVPVEGEEPDTDEDTPPKRTDQEEQDVSSDGD

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (96%)
Global pLDDT	82.17
Species	Atlantic herring
UniProt	A0A6P3WF85
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	341
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					62.9	217-263	47	1-216, 264-341	216	78

Model Sequence

Comments

Domain	Eukaryota
Family	Clupeidae
Species (Full Name)	Clupea harengus (Atlantic herring)
Gene	trmt10a
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A6P3WF85F1

AF4

Model Sequence

ESM1

Model Sequence