A0A6P3YR97 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	phytochrome A-like
Main knot	4₁ (59%)
Global pLDDT	84.34
Species	Chinese jujube
UniProt	A0A6P3YR97
Structure Prediction Model	AlphaFold v4: A0A6P3YR97
PDB structures	-
Model length	388
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.3	76-335	260	1-75, 336-388	75	53

Model Sequence

MSSSRPTNSSSSRHSARIIAQTTVDAKLHADFEETGSSFDYSSSVRVTNSVGLDVPPRTNKVTTAYLHQIQKGKLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCRAKHVKVLQDEKLQFDLTFCGSTLRAPHSCHVQYMENMDSIASLVMAVVVNEGDDEGDSPDSAQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQV

Comments

ESM1

Categories voted by users:

Information

Protein name	phytochrome A-like
Main knot	4₁ (59%)
Global pLDDT	78.14
Species	Chinese jujube
UniProt	A0A6P3YR97
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	388
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					40.7	76-387	312	1-75, 388-388	75	1

Model Sequence

Comments

Domain	Eukaryota
Family	Rhamnaceae
Species (Full Name)	Ziziphus jujuba (Chinese jujube) (Ziziphus sativa)
Gene	LOC107403548
PFAM codes	PF01590, PF08446
InterPro codes	IPR001294, IPR003018, IPR013516, IPR013654, IPR016132, IPR029016, IPR035965
PDB structures (whole Protein)	-

A0A6P3YR97F1

AF4

Model Sequence

ESM1

Model Sequence