A0A6Q2YK01 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (71%)
Global pLDDT	96.11
Species	Northern pike
UniProt	A0A6Q2YK01
Structure Prediction Model	AlphaFold v4: A0A6Q2YK01
PDB structures	-
Model length	380
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.8	20-271	252	1-19, 272-380	19	109

Model Sequence

MNTHSFILFILFSLPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRANVDYQKVVRDTIKHIGYDNSEKGFDYKTCNVLVALEQQSPDIAQGVHVDRQEEDMGAGDQGLMFGYATDETEECMPLTIILAHKLNYKMAELRRNGTIPWLRPDSKTQVTVHYEQQEGAVIPKRVHTVVISVQHDDFISLEEQKNVLKEKVIKAVVPAKYLDDRTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYAARWVAKSLVKAELCRRVLVQVSYAIGVAHPLSISVFTYGSSQRSEKELLQIVNKNFDLRPGVIVRELNLKRPIYQNTACYGHFGRSEFTWEVPKVLNF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (67%)
Global pLDDT	83.82
Species	Northern pike
UniProt	A0A6Q2YK01
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	380
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					74.5	16-271	256	1-15, 272-380	15	109

Model Sequence

Comments

Domain	Eukaryota
Family	Esocidae
Species (Full Name)	Esox lucius (Northern pike)
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A6Q2YK01F1

AF4

Model Sequence

ESM1

Model Sequence