| Protein name |
Phosphodiesterase
|
| Main knot |
31 (78%)
|
| Global pLDDT |
95.7
|
| Species |
bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7C4BRJ0
|
| PDB structures |
-
|
| Model length |
383
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
96.9 | 11-261 | 251 | 1-10, 262-383 | 10 | 122 |
|
Model Sequence |
MNIKKKKKVLVIGWDSAEPELVFDKFIDKMPNIKRLMDNGIYGELKSTIPAITCPAWMSMMTSKNPGKLGFYGFRNRKDYSYSGMTTANSTSVKEDTVWDILSKAEKKSIIIGVPQTYPPKPINGYMITCFLTPDTSSQYTYPPELKAEVERVSNGYMLDVEDFRTEKKDQLLKEIYDMTEKRFKVAEHLMTTRDWDFFMMVEMGIDRIQHGFWKFFDKTHSKYQPTKYESAIMDYYVYLDELAGKLISTAGDDTTVIVVSDHGAKKMDGGICVNEWLIKEGYLTLKEYPKEPKSFRELEVDWDKTIAWGEGGYYARIFLNVKGREPKGVIPPEDYEKVRDELAHKLEALGDEKGNPIGTKAFKPEDIYPVINGIPSDLTVYF
|
| Protein name |
Phosphodiesterase
|
| Main knot |
31 (72%)
|
| Global pLDDT |
94.04
|
| Species |
bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
383
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.7 | 13-263 | 251 | 1-12, 264-383 | 12 | 120 |
|
Model Sequence |
MNIKKKKKVLVIGWDSAEPELVFDKFIDKMPNIKRLMDNGIYGELKSTIPAITCPAWMSMMTSKNPGKLGFYGFRNRKDYSYSGMTTANSTSVKEDTVWDILSKAEKKSIIIGVPQTYPPKPINGYMITCFLTPDTSSQYTYPPELKAEVERVSNGYMLDVEDFRTEKKDQLLKEIYDMTEKRFKVAEHLMTTRDWDFFMMVEMGIDRIQHGFWKFFDKTHSKYQPTKYESAIMDYYVYLDELAGKLISTAGDDTTVIVVSDHGAKKMDGGICVNEWLIKEGYLTLKEYPKEPKSFRELEVDWDKTIAWGEGGYYARIFLNVKGREPKGVIPPEDYEKVRDELAHKLEALGDEKGNPIGTKAFKPEDIYPVINGIPSDLTVYF
|
A0A7C4BRJ0
IPR002591