A0A7C4SI89 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (71%)
Global pLDDT	87.87
Species	Chloroflexi bacterium
UniProt	A0A7C4SI89
Structure Prediction Model	AlphaFold v4: A0A7C4SI89
PDB structures	-
Model length	295
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.8	26-259	234	1-25, 260-295	25	36

Model Sequence

MHREHVGLRREVTVWGSFTWGYADVGADVYVALGLVMAAAQGATPLAFLIAGIVYIMVGLAYTEMAAAYPVAGGGHYFTLRGLGDFWGLVAGAALMLDYTVDVALFAMASAGYINFFFPQFREFRMALGPFPEVNLIWLGETLALILLLALLNIKGIRESSLFNEVLGALDLVMESSIIVIGFAFAWRPELFVHQWQTQFPSLHQLLYAVSIAVISYVGLESVSQAAQETIRPATVIPRTSLALIIIVLLFALSFPTVSLGILPWQEIAAREGDPVARLASQLPLVGFLAGPAAA

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (57%)
Global pLDDT	90.15
Species	Chloroflexi bacterium
UniProt	A0A7C4SI89
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	295
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.8	26-259	234	1-25, 260-295	25	36

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Chloroflexi
Species (Full Name)	Chloroflexi bacterium
Gene	ENT61_01960
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A7C4SI89F1

AF4

Model Sequence

ESM1

Model Sequence