| Protein name |
Phosphodiesterase
|
| Main knot |
31 (70%)
|
| Global pLDDT |
95.8
|
| Species |
Armatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7C4Z5E0
|
| PDB structures |
-
|
| Model length |
387
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
96.4 | 9-259 | 251 | 1-8, 260-387 | 8 | 128 |
|
Model Sequence |
MSAKNRVVVVGLDSLEPSLVFERWRTELPNLRKLMEGGLYGELCSTIPPITVPAWMSMFTGHDPGSLGIYGFRNRRDRSYDGLATANSRMVTVPTVWDVIGGAGLKSVVLGVPLTHPPKPINGWMVSGFPLPGTEGDYTYPAELKEEIRSVVGEYMPDVAEFRTDDKKHLIEQVYVMTDRRFALARHLMKTRDWDLFVMVEIGPDRMHHGFWRYYDSEHPKHEPSSPFATAIRDYYRHLDDQLGSLLELSGDAVFVVVSDHGAQRMEGGVCINEWLMREGYLALSSQPDGITRMSPAAVDWDKTLAWGDGGYYGRIFLNVRGREPRGVVLPQDYEKVRSELIAALEAMTDESGHPLGTKVYRPEDVYSECRNIPPDLIVYFGNLRWR
|
| Protein name |
Phosphodiesterase
|
| Main knot |
31 (61%)
|
| Global pLDDT |
92.92
|
| Species |
Armatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
387
|
| ESM generation time |
2023-06-27: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.6 | 9-261 | 253 | 1-8, 262-387 | 8 | 126 |
|
Model Sequence |
MSAKNRVVVVGLDSLEPSLVFERWRTELPNLRKLMEGGLYGELCSTIPPITVPAWMSMFTGHDPGSLGIYGFRNRRDRSYDGLATANSRMVTVPTVWDVIGGAGLKSVVLGVPLTHPPKPINGWMVSGFPLPGTEGDYTYPAELKEEIRSVVGEYMPDVAEFRTDDKKHLIEQVYVMTDRRFALARHLMKTRDWDLFVMVEIGPDRMHHGFWRYYDSEHPKHEPSSPFATAIRDYYRHLDDQLGSLLELSGDAVFVVVSDHGAQRMEGGVCINEWLMREGYLALSSQPDGITRMSPAAVDWDKTLAWGDGGYYGRIFLNVRGREPRGVVLPQDYEKVRSELIAALEAMTDESGHPLGTKVYRPEDVYSECRNIPPDLIVYFGNLRWR
|
A0A7C4Z5E0
IPR002591