| Protein name |
Integral membrane protein
|
| Main knot |
52 (60%)
|
| Global pLDDT |
81.88
|
| Species |
Nitrospina sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7C7IT78
|
| PDB structures |
-
|
| Model length |
348
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
78.2 | 155-254 | 100 | 1-154, 255-348 | 154 | 94 |
|
Model Sequence |
MIELKRDNLLFTFPEVHPNANLSINFQRTLRIPDDDKNYPLPPGLGSFPVRHVDNFTEKVPDQWIERGGVMFPMRQSEAMWITFNSVQATTEKGWDKFEPLDGEYPFAVKVATGKINAVTGEPWENSLHKNPQDYLVVPDQPWLDGYCVEKGIIRQFVAMPLGSGYTAEEQITGEAEHGGLQIIVYPMKADKYEKLMSERSSCSELSSYNEVSFCVDFDMGLAPGGKMQQEVYEDEYEQYSWDLKHSSRCFVHINNSHAWQSITGEEPPGIPLTAKEYSENGMPWFDYYDEKASSLGGSKKLSNLKSITEKAKEKRDDPLPENESANPKHVIKIRKGLKKNQVREGSF
|
| Protein name |
Integral membrane protein
|
| Main knot |
52 (51%)
|
| Global pLDDT |
68.64
|
| Species |
Nitrospina sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
348
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
83.4 | 26-282 | 257 | 1-25, 283-348 | 25 | 66 |
|
Model Sequence |
MIELKRDNLLFTFPEVHPNANLSINFQRTLRIPDDDKNYPLPPGLGSFPVRHVDNFTEKVPDQWIERGGVMFPMRQSEAMWITFNSVQATTEKGWDKFEPLDGEYPFAVKVATGKINAVTGEPWENSLHKNPQDYLVVPDQPWLDGYCVEKGIIRQFVAMPLGSGYTAEEQITGEAEHGGLQIIVYPMKADKYEKLMSERSSCSELSSYNEVSFCVDFDMGLAPGGKMQQEVYEDEYEQYSWDLKHSSRCFVHINNSHAWQSITGEEPPGIPLTAKEYSENGMPWFDYYDEKASSLGGSKKLSNLKSITEKAKEKRDDPLPENESANPKHVIKIRKGLKKNQVREGSF
|
| Domain |
Bacteria
|
| Family |
Nitrospinaceae
|
| Species (Full Name) |
Nitrospina sp
|
| Gene |
EYO37_06370
|
| PDB structures (whole Protein) |
-
|
A0A7C7IT78