A0A7C7VIW8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium:calcium symporter
Main knot	4₁ (60%)
Global pLDDT	83.15
Species	Desulfarculaceae bacterium
UniProt	A0A7C7VIW8
Structure Prediction Model	AlphaFold v4: A0A7C7VIW8
PDB structures	-
Model length	313
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.3	24-288	265	1-23, 289-313	23	25

Model Sequence

MRKLKGKSIVANPYVYALTLAVYCSSWTFYGSVGEVTNSGFKFITVYIGPTLTAFAWGFILRKMIRITKENNITSIADFLSSRYGKCSYLGAQVTTFAILGIMPYIALQLKSISTTFELLVHPELRPGLQTVASNTIANYPHPFYLETAFYISLVLALFGALFGARHLDAAEKHEGMVAAVALESVVKLIAFFCVGLFVTFGIFDGFKDILTQIANHDIYKELLLINTSPTNSYQAWFTMIILSMAAILFLPRQFHIAVIENQSEKHIKKAMYLFPLYLFLINLFVIPIAFGGLLEIGGPTSIADTYVLTLPL

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:calcium symporter
Main knot	4₁ (52%)
Global pLDDT	78.69
Species	Desulfarculaceae bacterium
UniProt	A0A7C7VIW8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	313
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					69.4	25-288	264	1-24, 289-313	24	25

Model Sequence

Comments

Domain	Bacteria
Family	Desulfarculaceae
Species (Full Name)	Desulfarculaceae bacterium
Gene	EYP64_01805
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A7C7VIW8F1

AF4

Model Sequence

ESM1

Model Sequence