A0A7I4YSQ1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	SAM-dependent MTase TRM10-type domain-containing protein
Main knot	3₁ (88%)
Global pLDDT	88.16
Species	Barber pole worm
UniProt	A0A7I4YSQ1
Structure Prediction Model	AlphaFold v4: A0A7I4YSQ1
PDB structures	-
Model length	390
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.5	251-301	51	1-250, 302-390	250	89

Model Sequence

MKWLENIYYRAAWKFRRVFRLDSQTIAPIQWHEPLLKTFPERTLDERLDESQKQRLRDIVEEVRTISMLTKHFPSQIKSEDWLVLLECHTRKQRLDHLKFLRNRELEREKDLLKKRLKTPLPPREKQEESDHVLYFPHTKLAKDQRSMAWQKVARAHRCGEPSLVVDCRFLPLLSPRGAELTAIQLKYMISENRDDRAPWQLYFTSFDYSSERIRRLKDRHLSVIASPSTCSPIISPQSFTDLFERDRIVYLSPDADEEIEDVKQSDVYVLGGIVDRVAEKGIPRQASLETAVSEGVRCKKLPLDKYVKWKSGTKFLTLTAVSTILRDVYSSGGDWEFALRKNIPVRNIRSVEEKSIGGRILHNKIRQFDRQLLQIVERELGEEVVRERN

Comments

ESM1

Categories voted by users:

Information

Protein name	SAM-dependent MTase TRM10-type domain-containing protein
Main knot	3₁ (87%)
Global pLDDT	78.99
Species	Barber pole worm
UniProt	A0A7I4YSQ1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	390
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					52.6	251-301	51	1-250, 302-390	250	89

Model Sequence

Comments

Domain	Eukaryota
Family	Haemonchidae
Species (Full Name)	Haemonchus contortus (Barber pole worm)
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A7I4YSQ1F1

AF4

Model Sequence

ESM1

Model Sequence