| Protein name |
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
|
| Main knot |
31 (76%)
|
| Global pLDDT |
96.41
|
| Species |
Ignisphaera aggregans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7J2U262
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A7J2U262: L+1C
|
| Model length |
235
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
95.4 | 151-202 | 52 | 1-150, 203-235 | 150 | 33 |
|
Model Sequence |
MHLIIAEAGLELVPREIEAEPSIVMNAKRRKKRPNEILLDISLHYRAMKKLNKWFKRGRPDIIHVTMLLALSSLLNTANLLRLYVHTIKDIVIYVDPQTRIPRNYNRFVGLMEQLLVTGSIPPDSPKPLMWIENSSLQQLLEKIGCTTSILMHEKGIPLKPIEFAKAITDKMIKNETVCIAVGGFQHGDFEESTLRLFKNSVSLYPAPLDTWSITSMIINSIENCEEISKIIWHT
|
| Protein name |
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
|
| Main knot |
31 (78%)
|
| Global pLDDT |
94.5
|
| Species |
Ignisphaera aggregans
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A7J2U262: L+1C
|
| Model length |
235
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.2 | 151-202 | 52 | 1-150, 203-235 | 150 | 33 |
|
Model Sequence |
MHLIIAEAGLELVPREIEAEPSIVMNAKRRKKRPNEILLDISLHYRAMKKLNKWFKRGRPDIIHVTMLLALSSLLNTANLLRLYVHTIKDIVIYVDPQTRIPRNYNRFVGLMEQLLVTGSIPPDSPKPLMWIENSSLQQLLEKIGCTTSILMHEKGIPLKPIEFAKAITDKMIKNETVCIAVGGFQHGDFEESTLRLFKNSVSLYPAPLDTWSITSMIINSIENCEEISKIIWHT
|
A0A7J2U262
IPR005304