| Protein name |
GIY-YIG nuclease family protein
|
| Main knot |
61 (45%)
|
| Global pLDDT |
90.88
|
| Species |
Candidatus Poseidoniales
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A7J4GML4
|
| PDB structures |
-
|
| Model length |
344
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.5 | 1-344 | 344 | 0 | 0 |
|
Model Sequence |
MAGDNFDKGWVYILHFKIPGLKSNYFKIGLTKNPIPERISGLQTGNPFKIVKHHHFDSECMGLLEGHLHKIFAERRFRKEWFTFAPRVLKKVIKEGTDFSNKYNPLAIKLRKLDKQTSIHKPMTPTANHLKLHKEAIAISRKIQEIELQRDIAKENLRRLTGNCIGIDGITGFTGLKIPAPSLKSSELKKHDLSEWQKWQITGIFSKKEEIIGVGTKLKNHPKLDTKHKVLKNSASSLFDLSTYNAKTKSRSKSSRNYHAEYIDCIGELGLLKADLDMIIIQFKLDCRRRHEIIDVFKYLRTDNGTKFDKDGFNTNKRKAYDARWFYSNNPSPSFSVSNAIGYQ
|
| Protein name |
GIY-YIG nuclease family protein
|
| Main knot |
61 (46%)
|
| Global pLDDT |
72.31
|
| Species |
Candidatus Poseidoniales
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
344
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
88.1 | 154-338 | 185 | 1-153, 339-344 | 153 | 6 |
|
Model Sequence |
MAGDNFDKGWVYILHFKIPGLKSNYFKIGLTKNPIPERISGLQTGNPFKIVKHHHFDSECMGLLEGHLHKIFAERRFRKEWFTFAPRVLKKVIKEGTDFSNKYNPLAIKLRKLDKQTSIHKPMTPTANHLKLHKEAIAISRKIQEIELQRDIAKENLRRLTGNCIGIDGITGFTGLKIPAPSLKSSELKKHDLSEWQKWQITGIFSKKEEIIGVGTKLKNHPKLDTKHKVLKNSASSLFDLSTYNAKTKSRSKSSRNYHAEYIDCIGELGLLKADLDMIIIQFKLDCRRRHEIIDVFKYLRTDNGTKFDKDGFNTNKRKAYDARWFYSNNPSPSFSVSNAIGYQ
|