A0A7J6B5H9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (68%)
Global pLDDT	97.18
Species	Black bullhead
UniProt	A0A7J6B5H9
Structure Prediction Model	AlphaFold v4: A0A7J6B5H9
PDB structures	-
Model length	390
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.4	19-285	267	1-18, 286-390	18	105

Model Sequence

MAAMNDFTDDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPEAKVACEAVCKTGMVLLCGEITSKGSVDYQKVVRDTIKHIGYDSSDKGFDYKTCNVLVALEQQSPDIAQGVHIDRREEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKMAELRRDGTIPWLRPDSKTQVTVHYKQENGAMVPMRVHTVVISVQHDDFISLEEQKRILKEKVIKAVVPAKYLDDKTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCKRVLVQLSYAIGVNHPLSISLFTYGSSEKKEKELLHIVNKNFDLRPGVIVRDLKLKRPIYQETACYGHFGRPEFTWEVPKTLIF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (62%)
Global pLDDT	82.99
Species	Black bullhead
UniProt	A0A7J6B5H9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	390
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					77.6	21-281	261	1-20, 282-390	20	109

Model Sequence

Comments

Domain	Eukaryota
Family	Ictaluridae
Species (Full Name)	Ameiurus melas (Black bullhead) (Silurus melas)
Gene	AMELA_G00049760
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A7J6B5H9F1

AF4

Model Sequence

ESM1

Model Sequence