| Protein name |
Amino acid permease
|
| Main knot |
41 (51%)
|
| Global pLDDT |
82.23
|
| Species |
Actinomycetia bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7K1E7M7
|
| PDB structures |
-
|
| Model length |
324
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.6 | 62-312 | 251 | 1-61, 313-324 | 61 | 12 |
|
Model Sequence |
MPKSWTDDAPAPEVLKDQAHLKDTFFYTTKRRFLGNPLNRHSLSHQRLKKRFALGILSSDCISSSAYGSEQILIALLPAFGLAAFAILMPMTAVVLAILLIITLSYRDVINVYTKVGGAYIVSRDNFGPVVAQIAAVALILDYVVTIAIQSAAGVAAIISTFPSLSPYKIPMILVVITLLTYGNLRGVKEAGKAFAFPTYFFVGSMFIVFTVGLYRQFNGTLVQLSVEQPGAIEVGEGQGLLTFAAIFILLRAFANGGSSLTGLEAISDSVALFKSPEHVNARRTLYTMSALLGTLVLGVSWFAHKIHAVPYESGTPTVISQIA
|
| Protein name |
Amino acid permease
|
| Main knot |
41 (57%)
|
| Global pLDDT |
85.25
|
| Species |
Actinomycetia bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
324
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
67.4 | 62-310 | 249 | 1-61, 311-324 | 61 | 14 |
|
Model Sequence |
MPKSWTDDAPAPEVLKDQAHLKDTFFYTTKRRFLGNPLNRHSLSHQRLKKRFALGILSSDCISSSAYGSEQILIALLPAFGLAAFAILMPMTAVVLAILLIITLSYRDVINVYTKVGGAYIVSRDNFGPVVAQIAAVALILDYVVTIAIQSAAGVAAIISTFPSLSPYKIPMILVVITLLTYGNLRGVKEAGKAFAFPTYFFVGSMFIVFTVGLYRQFNGTLVQLSVEQPGAIEVGEGQGLLTFAAIFILLRAFANGGSSLTGLEAISDSVALFKSPEHVNARRTLYTMSALLGTLVLGVSWFAHKIHAVPYESGTPTVISQIA
|
| Domain |
Bacteria
|
| Family |
unclassified Actinomycetia
|
| Species (Full Name) |
Actinomycetia bacterium
|
| Gene |
F2553_05190
|
| PDB structures (whole Protein) |
-
|
A0A7K1E7M7