A0A7K4J4E9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	SC5AA protein
Main knot	4₁ (59%)
Global pLDDT	83.76
Species	Greater roadrunner
UniProt	A0A7K4J4E9
Structure Prediction Model	AlphaFold v4: A0A7K4J4E9
PDB structures	-
Model length	329
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.8	68-318	251	1-67, 319-329	67	11

Model Sequence

TMEDNSTVGSFTPLPQFSVADIVVVVVYFSLNVAVGIWSSCRVNRNTVSGYFLAGRDMAWWPIGASLFASSEGSGLFIGLAGTGAAGGIAVTGFEWNATYALLALAWVFVPVYISSGIVTMPEYLQRRFGGERIRMYLSGLSLLLSIFTKISTDLYSGALFVQVCLGWDLYLSTVLMLVVTGLYTIAGRGLAAVIYTDALQTLIMVLGAIALAVKAFNEIGGYPNLEEAYLKAMPSKIVPNTTCHLPRADAMHLFRDPVSGDLPWTGMTFGLSIMATWYWCTDQVIVQRSLSAKSLSHAKAGSILASYLKMLPLFVIIMPGMISRILYP

Comments

ESM1

Categories voted by users:

Information

Protein name	SC5AA protein
Main knot	4₁ (56%)
Global pLDDT	89.41
Species	Greater roadrunner
UniProt	A0A7K4J4E9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	329
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	68-318	251	1-67, 319-329	67	11

Model Sequence

Comments

Domain	Eukaryota
Family	Neomorphidae
Species (Full Name)	Geococcyx californianus (Greater roadrunner) (Saurothera californiana)
Gene	Slc5a10 GEOCAL_R08954
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A7K4J4E9F1

AF4

Model Sequence

ESM1

Model Sequence