A0A7K4JQ98 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (68%)
Global pLDDT	81.64
Species	Greater roadrunner
UniProt	A0A7K4JQ98
Structure Prediction Model	AlphaFold v4: A0A7K4JQ98
PDB structures	-
Model length	306
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.2	59-288	230	1-58, 289-306	58	18

Model Sequence

MGERTDCTKSHTSLAEYSPVSKSDRTDPSEIQDGNQNTMQLKKEISLINGISLIVGNMIGSGIFVSPKGVLIYSKSYGLSLIIWAIGGIFSVFGALCYAELGTTITKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIVQPFFPSCDPPYLACRLIAAACECLLTFINCAYVKWGTRVQDIFTYAKVTALIVIIITGLVKICQGHSAHFENSFQGSSFDIGDISLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIAVSMPIVTVIYIMTNIAYYTVLDVKAVLSSDAVAV

Comments

ESM1

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (66%)
Global pLDDT	91.85
Species	Greater roadrunner
UniProt	A0A7K4JQ98
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	306
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					78.8	59-288	230	1-58, 289-306	58	18

Model Sequence

Comments

Domain	Eukaryota
Family	Neomorphidae
Species (Full Name)	Geococcyx californianus (Greater roadrunner) (Saurothera californiana)
Gene	Slc7a6_1 GEOCAL_R09990
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A7K4JQ98F1

AF4

Model Sequence

ESM1

Model Sequence