A0A7K7VZA0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	AVT2 protein
Main knot	3₁ (45%)
Global pLDDT	89.76
Species	Nothocercus julius
UniProt	A0A7K7VZA0
Structure Prediction Model	AlphaFold v4: A0A7K7VZA0
PDB structures	-
Structure in AlphaLasso	A0A7K7VZA0: L_+1N
Model length	395
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.1	1-338	338	339-395	0	57

Model Sequence

GLPYSMKQAGFPLGLLLLFGVACITDYSIILLIKGGNLSSTSTYQELVRKTYGLTGYLILSTLQFLYPFIAMISYNVITGDTLTKVFQRIPGVAPDSILSDRHFIILFSTIIFTLPISLYRDIAKVGKISLISLILTIVILVIVTVRTVTFSPQVPKSENAWIFAKSNAVQAVGVMSFAFICHHNSFLIYGSLEEPTLKNWSRITHVSVSLAVVISVVFAACGYMTFAEYTEGDIFENYCRDDNLATFGRFCYGITVILTFPLECFVTREVIANVFFRGNLSTVFHIFVTVIIVVVATAISLVYDCLGIVLELNGVLSATPLIFIIPTACYLRLSKERWSHSDNILSCLLLAVGVLVMTVGLVLTIWHPQECSHGKEMFYCIPSNVSFNNSTLPP

Comments

ESM1

Categories voted by users:

Information

Protein name	AVT2 protein
Main knot	3₁ (39%)
Global pLDDT	92.84
Species	Nothocercus julius
UniProt	A0A7K7VZA0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7K7VZA0: L_+1N
Model length	395
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.3	1-330	330	331-395	0	65

Model Sequence

Comments

Domain	Eukaryota
Family	Tinamidae
Species (Full Name)	Nothocercus julius
Gene	Avt2_0 NOTJUL_R07033
PFAM codes	PF01490
InterPro codes	IPR013057
PDB structures (whole Protein)	-

A0A7K7VZA0F1

AF4

Model Sequence

ESM1

Model Sequence