A0A7K9GG88 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (67%)
Global pLDDT	85.16
Species	White-winged crossbill
UniProt	A0A7K9GG88
Structure Prediction Model	AlphaFold v4: A0A7K9GG88
PDB structures	-
Structure in AlphaLasso	A0A7K9GG88: L₀
Model length	365
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.0	57-364	308	1-56, 365-365	56	1

Model Sequence

MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGTQNLFL

Comments

ESM1

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (57%)
Global pLDDT	85.23
Species	White-winged crossbill
UniProt	A0A7K9GG88
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7K9GG88: L₀
Model length	365
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.3	63-340	278	1-62, 341-365	62	25

Model Sequence

Comments

Domain	Eukaryota
Family	Fringillidae
Species (Full Name)	Loxia leucoptera (White-winged crossbill)
Gene	Slc6a1_1 LOXLEU_R01364
PFAM codes	PF00209
InterPro codes	IPR000175, IPR002980, IPR037272
PDB structures (whole Protein)	-

A0A7K9GG88F1

AF4

Model Sequence

ESM1

Model Sequence