A0A7L1J2A9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (68%)
Global pLDDT	96.79
Species	Double-banded courser
UniProt	A0A7L1J2A9
Structure Prediction Model	AlphaFold v4: A0A7L1J2A9
PDB structures	-
Model length	396
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.4	27-284	258	1-26, 285-396	26	112

Model Sequence

MNGPVDGLCDHTLDDEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSRAIVDYQRVVRDAIRHIGYDDSAKGFDYKTCNVLVALEQQSPDIAQGVHLHRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGELPWLRPDSKTQVTVQYIQENGAVIPVRVHTIVISVQHDETISLENMRRTLKDRVIQAVVPAKYLDEKTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYASRWVAKSLVKAGLCRRVLVQVSYAIGVAHPLSISLFTYGTSKKTEKELLDIVHRNFDLRPGVIVRDLDLKKPIYQRTACYGHFGRQEFSWEVPKKLVF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (76%)
Global pLDDT	83.07
Species	Double-banded courser
UniProt	A0A7L1J2A9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	396
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					70.7	27-287	261	1-26, 288-396	26	109

Model Sequence

Comments

Domain	Eukaryota
Family	Glareolidae
Species (Full Name)	Smutsornis africanus (Double-banded courser) (Rhinoptilus africanus)
Gene	Mat1a RHIAFR_R06686
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A7L1J2A9F1

AF4

Model Sequence

ESM1

Model Sequence