Protein name |
Transporter
|
Main knot |
41 (65%)
|
Global pLDDT |
85.33
|
Species |
Asian short-toed lark
|
UniProt | |
Structure Prediction Model |
AlphaFold v4:
![]() |
PDB structures |
-
|
Structure in AlphaLasso |
![]() |
Model length |
362
|
AlphaFold deposition date |
2022-06-01
|
AlphaKnot deposition date |
2023-01-27
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
![]() |
90.7 | 52-343 | 292 | 1-51, 344-362 | 51 | 19 |
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Model Sequence |
LPSPIPWPLTQPVTPDLLVSPSSQDGDLGSECPEDRGNWTGRLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFIMLAICGIPIFFMELSLGQFSSLGPLAVWKISPLFKGVGMGTILIVSLVAIYYNMIIAYVLFYLFASLTSDLPWQHCGNWWNTDLCLDHHVIRAGNNTLPVNLSNTVSPSEEYWSRYVLHIQGSSGIGDPGRIRWNLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYLILVMLLIRGVTLEGAWKGIQFYLTPQFDHLLSSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQELGVPVNQVAKAG
|
Protein name |
Transporter
|
Main knot |
41 (61%)
|
Global pLDDT |
87.99
|
Species |
Asian short-toed lark
|
UniProt | |
Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
PDB structures |
-
|
Structure in AlphaLasso |
![]() |
Model length |
362
|
ESM generation time |
2023-06-27: download the generated 3D model
|
AlphaKnot deposition date |
2023-06-28
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
![]() |
72.1 | 24-362 | 339 | 1-23, | 23 | 0 |
![]() |
Model Sequence |
LPSPIPWPLTQPVTPDLLVSPSSQDGDLGSECPEDRGNWTGRLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFIMLAICGIPIFFMELSLGQFSSLGPLAVWKISPLFKGVGMGTILIVSLVAIYYNMIIAYVLFYLFASLTSDLPWQHCGNWWNTDLCLDHHVIRAGNNTLPVNLSNTVSPSEEYWSRYVLHIQGSSGIGDPGRIRWNLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYLILVMLLIRGVTLEGAWKGIQFYLTPQFDHLLSSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQELGVPVNQVAKAG
|