A0A7L3HQE3 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (67%)
Global pLDDT	74.43
Species	red-billed oxpecker
UniProt	A0A7L3HQE3
Structure Prediction Model	AlphaFold v4: A0A7L3HQE3
PDB structures	-
Model length	311
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.5	59-293	235	1-58, 294-311	58	18

Model Sequence

MAERTDFTKSQISLAEYSPVNKSKRTDRSGKKAEDQNTLQLKKEISLINGISLIVGNMIGSGIFVSPKGVLIYSKSYGLSLIIWAIGGIFSVFGALCYAELGTTITKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYLVQPFFPTCDPPYLACRLLAAACECKYFLKFTMVSSYPGGKQGTRVQDVFTYAKVAALIAIIIAGLVEIFQGHTWYFKNSFAGSSSDIGEISLALYSALFSYSGWDTLNYVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNVAYYTVLDAQAVLSSDAVAV

Comments

ESM1

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (62%)
Global pLDDT	87.81
Species	red-billed oxpecker
UniProt	A0A7L3HQE3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	311
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					70.0	59-293	235	1-58, 294-311	58	18

Model Sequence

Comments

Domain	Eukaryota
Family	Sturnidae
Species (Full Name)	Buphagus erythrorhynchus (red-billed oxpecker)
Gene	Slc7a6 BUPERY_R03926
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A7L3HQE3F1

AF4

Model Sequence

ESM1

Model Sequence