A0A7L3PGY0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	SC5AA protein
Main knot	4₁ (63%)
Global pLDDT	86.91
Species	elegant woodcreeper
UniProt	A0A7L3PGY0
Structure Prediction Model	AlphaFold v4: A0A7L3PGY0
PDB structures	-
Model length	328
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.0	69-317	249	1-68, 318-328	68	11

Model Sequence

MMEGNSTAGVFTPSQQFSVADLVVVVAYFSLNVGVGIWSSCRANRNTVSGYFLAGRDMAWWPVGASLFASSEGSGLFLGLAGTGAAGGIAVAGFEWNATYALLALAWVFVPVYISSGIVTMPEYLQRRFGGERIRMYLSSLSLLLSIFTKISTDLYSGALFVQVCLGWDLYLSTILMLVVMGLYTIAGGLAAVIYTDTLQTLIMVLGAIVLAVKAFNEIGGYPNLEEAYLKAVPSKIIPNTTCHLPRADAMHLFRDPVSGDLPWTGMTFGLSIMATWYWCTDQVIVQRSLSAKSLSHAKAGSILASYLKMLPLFVIIMPGMISRVLYP

Comments

ESM1

Categories voted by users:

Information

Protein name	SC5AA protein
Main knot	4₁ (60%)
Global pLDDT	89.05
Species	elegant woodcreeper
UniProt	A0A7L3PGY0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	328
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.4	69-319	251	1-68, 320-328	68	9

Model Sequence

Comments

Domain	Eukaryota
Family	Dendrocolaptidae
Species (Full Name)	Xiphorhynchus elegans (elegant woodcreeper)
Gene	Slc5a10 XIPELE_R06545
PFAM codes	PF00474
InterPro codes	IPR001734, IPR018212, IPR038377
PDB structures (whole Protein)	-

A0A7L3PGY0F1

AF4

Model Sequence

ESM1

Model Sequence