A0A7L3XLT0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (64%)
Global pLDDT	82.7
Species	Cory's shearwater
UniProt	A0A7L3XLT0
Structure Prediction Model	AlphaFold v4: A0A7L3XLT0
PDB structures	-
Structure in AlphaLasso	A0A7L3XLT0: L₀
Model length	371
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.2	59-370	312	1-58, 371-371	58	1

Model Sequence

MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVRLKSTVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGIQYIFL

Comments

ESM1

Categories voted by users:

Information

Protein name	Transporter
Main knot	4₁ (60%)
Global pLDDT	81.78
Species	Cory's shearwater
UniProt	A0A7L3XLT0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7L3XLT0: L₀
Model length	371
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					70.9	62-346	285	1-61, 347-371	61	25

Model Sequence

Comments

Domain	Eukaryota
Family	Procellariidae
Species (Full Name)	Calonectris borealis (Cory's shearwater)
Gene	Slc6a1_0 CALBOR_R13809
PFAM codes	PF00209
InterPro codes	IPR000175, IPR002980, IPR037272
PDB structures (whole Protein)	-

A0A7L3XLT0F1

AF4

Model Sequence

ESM1

Model Sequence