A0A7M4DXB0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (82%)
Global pLDDT	88.22
Species	Saltwater crocodile
UniProt	A0A7M4DXB0
Structure Prediction Model	AlphaFold v4: A0A7M4DXB0
PDB structures	-
Model length	331
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.8	11-223	213	1-10, 224-331	10	108

Model Sequence

MAGGGSAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLRPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDIHLGETLSEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQSSNMLSSVQSEVAKYQMLIDEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKAQEAK

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (84%)
Global pLDDT	87.8
Species	Saltwater crocodile
UniProt	A0A7M4DXB0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	331
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.1	12-223	212	1-11, 224-331	11	108

Model Sequence

Comments

Domain	Eukaryota
Family	Crocodylidae
Species (Full Name)	Crocodylus porosus (Saltwater crocodile) (Estuarine crocodile)
Gene	UCHL5
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR033837, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A7M4DXB0F1

AF4

Model Sequence

ESM1

Model Sequence