A0A7N2R2Q4 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Neprosin
Main knot	4₁ (67%)
Global pLDDT	80.11
Species	Valley oak
UniProt	A0A7N2R2Q4
Structure Prediction Model	AlphaFold v4: A0A7N2R2Q4
PDB structures	-
Structure in AlphaLasso	A0A7N2R2Q4: L_-1C
Model length	398
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					78.1	15-315	301	1-14, 316-398	14	83

Model Sequence

MAPPCGSERRWSRAVKMTFYCLFFLIPMSSAGNRNINTIFGKKQKLEVQQQLKRLNKPALKSIESPDGDIIDCVDIYKQPAFDHPLLKNHTIQMRPSSYPEGFSFDEINDVSSNFEPEFTQPWHLNGRCPEGTIPIRRTKEEDLLRAGSVANFGRKKYHTNPHTQSNINLDIHEYATYSETWDKYYGMTADMNLWNPYTQEENEFSNSQLWVVKGEYGQDLDTIEVGAMDDAYQSTGCYNLLCPGFVHVDKEIALGATVTPYSKYGGNQYALKFYIWKDVNGRGNWWMNINNRVFGYWPSSLFSILSDSASTVRWGGEIINYNSGGQHTTTQMGSGHFAEEGPDKASFFKNLNVIDGKQIQRAPRDPEISMTKPNCYTIKDYGGFFYLGGPGRNPNCP

Comments

ESM1

Categories voted by users:

Information

Protein name	Neprosin
Main knot	3₁ (77%)
Global pLDDT	75.25
Species	Valley oak
UniProt	A0A7N2R2Q4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7N2R2Q4: L_-1C
Model length	398
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					46.4	18-313	296	1-17, 314-398	17	85

Model Sequence

Comments

Domain	Eukaryota
Family	Fagaceae
Species (Full Name)	Quercus lobata (Valley oak)
PFAM codes	PF03080, PF14365
InterPro codes	IPR004314, IPR025521
PDB structures (whole Protein)	-

A0A7N2R2Q4F1

AF4

Model Sequence

ESM1

Model Sequence