A0A7R9ZCB2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Hypothetical protein
Main knot	5₂ (64%)
Global pLDDT	82.3
Species	Ostreococcus mediterraneus
UniProt	A0A7R9ZCB2
Structure Prediction Model	AlphaFold v4: A0A7R9ZCB2
PDB structures	-
Structure in AlphaLasso	A0A7R9ZCB2: L_+1N
Model length	367
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.7	35-329	295	1-34, 330-367	34	38

Model Sequence

MSMQSKPSVAAGARTAHRRAPARVTAHHGPMTALMFTPDNALAGGLILGSMTIAKKLNTGTNLGISGETKAAMRGEAKASTAAFLLGLFAAGYVAPMILGAQVATPMVEAPRAIIAGALVGLGTSVGCGCTSGHGISGIGRFNIRSMLFTCIFMIVGAATVAATGTLDELHVSQATKTISNLARAPEVNMVLYSKVFAAGVAIQGALYALAKAQGGGVTSLVEKLSVVSDHVSGLFFGLGLVISGMTNPAKVAGFLAVTSQAFDPSLAFVMGGALSLVVATTYVARGILKIQRPAMAREFKTSAKYIDNDLIIGAVLFGAGWGLAGVCPGPGLVSLVMNSGREITLWCLSFLLAQRLHLQFAGECAI

Comments

ESM1

Categories voted by users:

Information

Protein name	Hypothetical protein
Main knot	5₂ (54%)
Global pLDDT	83.12
Species	Ostreococcus mediterraneus
UniProt	A0A7R9ZCB2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7R9ZCB2: L_+1N
Model length	367
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					68.3	31-329	299	1-30, 330-367	30	38

Model Sequence

Comments

Domain	Eukaryota
Family	Bathycoccaceae
Species (Full Name)	Ostreococcus mediterraneus
Gene	OMED0937_LOCUS131
PFAM codes	PF04143
InterPro codes	IPR007272, IPR046513
PDB structures (whole Protein)	-

A0A7R9ZCB2F1

AF4

Model Sequence

ESM1

Model Sequence