| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (71%)
|
| Global pLDDT |
85.14
|
| Species |
Skeletonema marinoi
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7S2KTA0
|
| PDB structures |
-
|
| Model length |
362
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
83.6 | 9-268 | 260 | 1-8, 269-362 | 8 | 94 |
|
Model Sequence |
MADSSGDWCTIESDPGVFTSLIESFGVKNVELTELWSLDDESLQSLTAPIEGVDNAAVHGLIFLFKWQRQSSSATASLEGRGTPLTGDAVPEGLFFAQQTVQNACATQAILSVLFNARDAIVAQEGGESKDEGDDNGRRLELGQTLSNFKDFTCHFPPDLRGEAIGSSDEIRTAHNSFGRSEDAFLSDPTKPKRMATDDDDVFHFIAYVPHENGCVYELDGLQQGPIRVGEFKKDEADKDQWIKVARDAIQARLSNYSPTEIKFNLMAIVQDRRTYLNERLSALAAIGIEENDPAMVHIQSELHAEEEKRAQWALENARRHHNYLPFCVELLRSLAGSGKMDGLMTKAKTTAAEKRKRQQKS
|
| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (77%)
|
| Global pLDDT |
86.39
|
| Species |
Skeletonema marinoi
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
362
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
86.6 | 1-362 | 362 | 0 | 0 |
|
Model Sequence |
MADSSGDWCTIESDPGVFTSLIESFGVKNVELTELWSLDDESLQSLTAPIEGVDNAAVHGLIFLFKWQRQSSSATASLEGRGTPLTGDAVPEGLFFAQQTVQNACATQAILSVLFNARDAIVAQEGGESKDEGDDNGRRLELGQTLSNFKDFTCHFPPDLRGEAIGSSDEIRTAHNSFGRSEDAFLSDPTKPKRMATDDDDVFHFIAYVPHENGCVYELDGLQQGPIRVGEFKKDEADKDQWIKVARDAIQARLSNYSPTEIKFNLMAIVQDRRTYLNERLSALAAIGIEENDPAMVHIQSELHAEEEKRAQWALENARRHHNYLPFCVELLRSLAGSGKMDGLMTKAKTTAAEKRKRQQKS
|
A0A7S2KTA0
IPR001578