| Protein name |
Lipoprotein
|
| Main knot |
51 (55%)
|
| Global pLDDT |
85.51
|
| Species |
Deltaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
 A0A7W0WV85
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A7W0WV85: LS2++N LS2++C L+1N
|
| Model length |
288
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.81 | 18-281 | 264 | 1-17, 282-288 | 17 | 7 |
|
Knot | ||||
 |
84.34 | 107-223 | 117 | 1-106, 224-288 | 106 | 65 | Knot |
Model Sequence |
MRALSALFAVLLLTLSTGCDVDCFDNGELETAYRDGEQAALAANAAAFDSGLAVGLSLTKEDGAREGAIEGYDTGYRAGYERSFPDGYEAGYSRGNSDGFADPTACSSGSADGFDDGDIDGYNAGFDDAHADGFEAGYPIGFADGASTCSSAARTNSPAAPDEAELSGDARTCYRRGYKEVEDHFAYDRGLAEGKRQNPDYQAGYTSTFPPNFERGRVDGLSAGYSDGWNDGYVAGYDNGYAAVYDGCYSSAYSNAYENAYDDGWDDGWPSGYDAGYADGYSDGATCQ
|
| Protein name |
Lipoprotein
|
| Main knot |
51 (50%)
|
| Global pLDDT |
86.06
|
| Species |
Deltaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A7W0WV85
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A7W0WV85: LS2++N LS2++C L+1N
|
| Model length |
288
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
89.9 | 71-282 | 212 | 1-70, 283-288 | 70 | 6 |
|
Model Sequence |
MRALSALFAVLLLTLSTGCDVDCFDNGELETAYRDGEQAALAANAAAFDSGLAVGLSLTKEDGAREGAIEGYDTGYRAGYERSFPDGYEAGYSRGNSDGFADPTACSSGSADGFDDGDIDGYNAGFDDAHADGFEAGYPIGFADGASTCSSAARTNSPAAPDEAELSGDARTCYRRGYKEVEDHFAYDRGLAEGKRQNPDYQAGYTSTFPPNFERGRVDGLSAGYSDGWNDGYVAGYDNGYAAVYDGCYSSAYSNAYENAYDDGWDDGWPSGYDAGYADGYSDGATCQ
|
| Protein name |
Lipoprotein
|
| Main knot |
71 (41%)
|
| Global pLDDT |
85.88
|
| Species |
Deltaproteobacteria bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A7W0WV85: LS2++N LS2++C L+1N
|
| Model length |
288
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
69.1 | 16-282 | 267 | 1-15, 283-288 | 15 | 6 |
|
Model Sequence |
MRALSALFAVLLLTLSTGCDVDCFDNGELETAYRDGEQAALAANAAAFDSGLAVGLSLTKEDGAREGAIEGYDTGYRAGYERSFPDGYEAGYSRGNSDGFADPTACSSGSADGFDDGDIDGYNAGFDDAHADGFEAGYPIGFADGASTCSSAARTNSPAAPDEAELSGDARTCYRRGYKEVEDHFAYDRGLAEGKRQNPDYQAGYTSTFPPNFERGRVDGLSAGYSDGWNDGYVAGYDNGYAAVYDGCYSSAYSNAYENAYDDGWDDGWPSGYDAGYADGYSDGATCQ
|
| Domain |
Bacteria
|
| Family |
unclassified Deltaproteobacteria
|
| Species (Full Name) |
Deltaproteobacteria bacterium
|
| Gene |
H0T65_16405
|
| PDB structures (whole Protein) |
-
|
A0A7W0WV85