A0A7W1CQN1 | AlphaKnot 2.0

AF4

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Information

Protein name	Amino acid permease
Main knot	4₁ (59%)
Global pLDDT	86.94
Species	Chthoniobacterales bacterium
UniProt	A0A7W1CQN1
Structure Prediction Model	AlphaFold v4: A0A7W1CQN1
PDB structures	-
Structure in AlphaLasso	A0A7W1CQN1: LL_-1,+2
Model length	279
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.4	30-268	239	1-29, 269-279	29	11

Model Sequence

MSPASSPAGPSRSLVRGLTLVPAAAIIITNVIGTGVFMKARVMTCNVGTPGMVLLAYAVAGIFTLAGALTFAELSAMMPRAGGQYNFIGAGFGRLWAYLYGWMETLIDGAASNAALAIVFVIFFNDLLGGALPPVTIQLMTVGILVAVTLLTLASVRANGFFATVITTLKVLLVLGIGCAAFLFSDGTWSHFAGSGAAGTCAGVPANARLGLTGFGAAIVGALWSYNGWSLITLIAEEVREPGRTLPRALIGASVLVIALYLFVNAGYFYVLSPETVAN

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (63%)
Global pLDDT	93.8
Species	Chthoniobacterales bacterium
UniProt	A0A7W1CQN1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7W1CQN1: LL_-1,+2
Model length	279
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.4	26-268	243	1-25, 269-279	25	11

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Chthoniobacterales
Species (Full Name)	Chthoniobacterales bacterium
Gene	H0W43_00805
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A7W1CQN1F1

AF4

Model Sequence

ESM1

Model Sequence