| Protein name |
Transposase
|
| Main knot |
31 (64%)
|
| Global pLDDT |
83.36
|
| Species |
Rhodanobacter sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7W9Z5L2
|
| PDB structures |
-
|
| Model length |
191
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
87.3 | 2-101 | 100 | 1-1, 102-191 | 1 | 90 |
|
Model Sequence |
MTAFRCTAKLLKVMKAELPGELLPASNRLGEWTANLVRVGRINLVLAVSEPTRFAVVIDAAPYATVPERFVHALFNALLDLGIPTDRAAAEVTAMQPLTLAASNSKSVLGTLNQFAWEMECDLRDGCAHSARELSHRLVQTIVLKPSHIVYPADRVREMFGLPPIDHRDRLAMLARSQVESFGMPATGSMN
|
| Protein name |
Transposase
|
| Main knot |
31 (63%)
|
| Global pLDDT |
86.99
|
| Species |
Rhodanobacter sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
191
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.0 | 2-101 | 100 | 1-1, 102-191 | 1 | 90 |
|
Model Sequence |
MTAFRCTAKLLKVMKAELPGELLPASNRLGEWTANLVRVGRINLVLAVSEPTRFAVVIDAAPYATVPERFVHALFNALLDLGIPTDRAAAEVTAMQPLTLAASNSKSVLGTLNQFAWEMECDLRDGCAHSARELSHRLVQTIVLKPSHIVYPADRVREMFGLPPIDHRDRLAMLARSQVESFGMPATGSMN
|
| Domain |
Bacteria
|
| Family |
Rhodanobacteraceae
|
| Species (Full Name) |
Rhodanobacter sp. MP7CTX1
|
| Gene |
HDE77_000857
|
| PDB structures (whole Protein) |
-
|
A0A7W9Z5L2