| Protein name |
Oxidoreductase
|
| Main knot |
31 (68%)
|
| Global pLDDT |
92.3
|
| Species |
Sphaerisporangium rubeum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7X0I9N8
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A7X0I9N8: L-1C
|
| Model length |
180
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
93.4 | 22-172 | 151 | 1-21, 173-180 | 21 | 8 |
|
Model Sequence |
MSMIDAQYLEWFNEQFDYADTLTWCTTTSLHDVLAAYDMQAEHAQPGHLDDLYEFRLFAGRLVHGTLVVQPNGCPTREALLALAQHGPCLSVQWSDTAPPGVTYLDKGQVIAFFDPFHREFHPVPDYASVERWIAATPAGQGMWDEDWALATIITAEALFQGAVDEEWVQATHTAVPEDE
|
| Protein name |
Oxidoreductase
|
| Main knot |
31 (59%)
|
| Global pLDDT |
82.18
|
| Species |
Sphaerisporangium rubeum
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A7X0I9N8: L-1C
|
| Model length |
180
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
76.5 | 22-172 | 151 | 1-21, 173-180 | 21 | 8 |
|
Model Sequence |
MSMIDAQYLEWFNEQFDYADTLTWCTTTSLHDVLAAYDMQAEHAQPGHLDDLYEFRLFAGRLVHGTLVVQPNGCPTREALLALAQHGPCLSVQWSDTAPPGVTYLDKGQVIAFFDPFHREFHPVPDYASVERWIAATPAGQGMWDEDWALATIITAEALFQGAVDEEWVQATHTAVPEDE
|
| Domain |
Bacteria
|
| Family |
Streptosporangiaceae
|
| Species (Full Name) |
Sphaerisporangium rubeum
|
| Gene |
BJ992_000625
|
| PDB structures (whole Protein) |
-
|
A0A7X0I9N8