A0A7X6DP25 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	TIGR02147 family protein
Main knot	6₁ (76%)
Global pLDDT	93.82
Species	Candidatus Manganitrophus
UniProt	A0A7X6DP25
Structure Prediction Model	AlphaFold v4: A0A7X6DP25
PDB structures	-
Model length	302
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.8	60-266	207	1-59, 267-302	59	36

Model Sequence

MAIFNKTKPIPEQESAGETERIYYEIRQTLRSTGVPQLFCSWAGYGKFLPLVWSALRPNAETRLYEEASDRLRAEGARLIKPMEKPDVSARVRLGESQTYHLRASLDLYHYLYPKLLVLTSAVQRALAGERIGKEENRELERIERGAPAGMIAMELAPEEPQDPRLRALFEEIKKTSKLPSVVMEIRTLALWPDYLFEARKRLMPIIVGPEYKQAEERLKQTARKEAGNLPYPVSIPREEVKGVVPDVGEITALTSDFERAYARCILNIALLQCDWRDPDALASSPFPAPSRRQVVAAGGMA

Comments

ESM1

Categories voted by users:

Information

Protein name	TIGR02147 family protein
Main knot	6₁ (74%)
Global pLDDT	90.55
Species	Candidatus Manganitrophus
UniProt	A0A7X6DP25
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	302
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.3	60-266	207	1-59, 267-302	59	36

Model Sequence

Comments

Domain	Bacteria
Family	Candidatus Manganitrophaceae
Species (Full Name)	Candidatus Manganitrophus noduliformans
Gene	MNODULE_08235
PFAM codes	PF10778
InterPro codes	IPR019714
PDB structures (whole Protein)	-

A0A7X6DP25F1

AF4

Model Sequence

ESM1

Model Sequence