A0A7Y6PTL0 | AlphaKnot 2.0

AF4

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Information

Protein name	Lipoprotein
Main knot	5₁ (53%)
Global pLDDT	87.73
Species	Kofleriaceae bacterium
UniProt	A0A7Y6PTL0
Structure Prediction Model	AlphaFold v4: A0A7Y6PTL0
PDB structures	-
Structure in AlphaLasso	A0A7Y6PTL0: LSL_2++,+1 LS_3+++N LLS_+1,3+++
Model length	300
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.3	19-293	275	1-18, 294-300	18	7

Model Sequence

MARLAPLLLGIAALLAVVPACDVDCFDGGALEQRYRDGQAEAEKANVVAFDRGKAAGLALTRVDGERDGNTEGYDDGFAAGYQSIYGYSAGYADGYYAGSGDGSTDPSACSDGASAGYSDGNNAGYSDGSDAGWSDAWNAGYDAGYADGAATCTATRTLPGSAPTVALAPAPASEVDPEDAKVCYQRGYDDQTDPTAYERGLSEGKRLNPDYQAGYQATYPAAYDRGTLDGTAAGYDAGWNDGYGDGYDDAYGSAYDACYSGAYTDGYDDGYGPGYEDGYSAGYGDGYSTGYDDGDDCGA

Comments

ESM1

Categories voted by users:

Information

Protein name	Lipoprotein
Main knot	7₁ (44%)
Global pLDDT	91.81
Species	Kofleriaceae bacterium
UniProt	A0A7Y6PTL0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A7Y6PTL0: LSL_2++,+1 LS_3+++N LLS_+1,3+++
Model length	300
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.6	21-293	273	1-20, 294-300	20	7

Model Sequence

Comments

Domain	Bacteria
Family	Kofleriaceae
Species (Full Name)	Kofleriaceae bacterium
Gene	HOV81_25445
PDB structures (whole Protein)	-

A0A7Y6PTL0F1

AF4

Model Sequence

ESM1

Model Sequence