| Protein name |
Heme utilization protein
|
| Main knot |
51 (75%)
|
| Global pLDDT |
71.97
|
| Species |
Pseudomonas reactans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A7Y8G6V2
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A7Y8G6V2: L+1N
|
| Model length |
246
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
77.6 | 37-238 | 202 | 1-36, 239-246 | 36 | 8 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQAGGWHPAPQPTGVVASVVTDVQNSIGNKYDDTKTENNASADGSVTYNSGNTGVNIQAGSGNQADNSGAISSAKGDFATVFAVVDVNQNSGLNNFVNKGTQNNASLDRSVNHNSGNVGYNGQAGQGNQGKNNLAITTADGKNIAAAANTEQNSLANNYLNTAATGYGHHGGKPQYVSNNASADNSINNNSGNIGVNLQSGAGNQASNSLSVGQGCSVCSSGVRF
|
| Protein name |
Heme utilization protein
|
| Main knot |
819 (88%)
|
| Global pLDDT |
66.89
|
| Species |
Pseudomonas reactans
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A7Y8G6V2: L+1N
|
| Model length |
246
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
53.6 | 54-237 | 184 | 1-53, 238-246 | 53 | 9 |
|
Model Sequence |
MKPQMALKPMVFALAALMAAAAQAGGWHPAPQPTGVVASVVTDVQNSIGNKYDDTKTENNASADGSVTYNSGNTGVNIQAGSGNQADNSGAISSAKGDFATVFAVVDVNQNSGLNNFVNKGTQNNASLDRSVNHNSGNVGYNGQAGQGNQGKNNLAITTADGKNIAAAANTEQNSLANNYLNTAATGYGHHGGKPQYVSNNASADNSINNNSGNIGVNLQSGAGNQASNSLSVGQGCSVCSSGVRF
|
| Domain |
Bacteria
|
| Family |
Pseudomonadaceae
|
| Species (Full Name) |
Pseudomonas reactans
|
| Gene |
HX893_28755
|
| PDB structures (whole Protein) |
-
|
A0A7Y8G6V2