| Protein name |
Transcriptional regulator
|
| Main knot |
81 (61%)
|
| Global pLDDT |
90.36
|
| Species |
Bacillus polymyxa
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A806PAP0
|
| PDB structures |
-
|
| Model length |
275
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.0 | 26-254 | 229 | 1-25, 255-275 | 25 | 21 |
|
Model Sequence |
MYLDELERFIKEGNYKNLKRREKKLAILRNSVMNHQESLGLKRMVWLEQRVVGTFCSVHTYEEDKRNLFDFLNRYGLLPLVLNISWDKLLPEEQKKLEQFSTPKQSYLRFSPKKLLWIDADELKGFETHVKQLDIIRQIEEWKRIRLFYDQELQRWDALRKSTIREMKEEIQRVELPSGSLNVVIPSPQLKIIDALGQLSEDSLVCAGRINYELVMEYAAKGFFKKSEINRFRQLKNITSRYILTNLEKDGWMHEFFLKKQLRLSRFSQESLWKS
|
| Protein name |
Transcriptional regulator
|
| Main knot |
81 (75%)
|
| Global pLDDT |
88.07
|
| Species |
Bacillus polymyxa
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
275
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.9 | 28-242 | 215 | 1-27, 243-275 | 27 | 33 |
|
Model Sequence |
MYLDELERFIKEGNYKNLKRREKKLAILRNSVMNHQESLGLKRMVWLEQRVVGTFCSVHTYEEDKRNLFDFLNRYGLLPLVLNISWDKLLPEEQKKLEQFSTPKQSYLRFSPKKLLWIDADELKGFETHVKQLDIIRQIEEWKRIRLFYDQELQRWDALRKSTIREMKEEIQRVELPSGSLNVVIPSPQLKIIDALGQLSEDSLVCAGRINYELVMEYAAKGFFKKSEINRFRQLKNITSRYILTNLEKDGWMHEFFLKKQLRLSRFSQESLWKS
|
| Domain |
Bacteria
|
| Family |
Paenibacillaceae
|
| Species (Full Name) |
Paenibacillus polymyxa (Bacillus polymyxa)
|
| Gene |
LK13_09380
|
| PDB structures (whole Protein) |
-
|
A0A806PAP0