A0A812GAW2 | AlphaKnot 2.0

AF4

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Information

Protein name	Ctu1 protein
Main knot	4₁ (73%)
Global pLDDT	80.47
Species	Symbiodinium sp
UniProt	A0A812GAW2
Structure Prediction Model	AlphaFold v4: A0A812GAW2
PDB structures	-
Model length	328
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					74.2	53-286	234	1-52, 287-328	52	42

Model Sequence

MCERCRDVAAVLRRPRTGEKVCKSCFCAVFEEEAHHTISRHGMFHRGQRVALVGQPASAANLALAAPARARCCLGARLGHADSTVLIHVMTKLNKRYDYGLNLFLLSVDEGITGYRDDSLEVSAGDGHLAGVRQASEAKRLALPDSTVKRNSEVYGLPLRVVSYAELYDGWTMDRVVRRTGLRSNCTYCGVFRRSALERGARLAEADMVATGHNADDVAETVLMNLLRGDSARLARCVDPITAGDTAGAAAAPGVLSAVPRCKPLMGAYEKEIVLYAFHNRLDYFSTECVYSPNAYRGFAREFVKGIEAARPSSILDTIRAGEGLAPL

Comments

ESM1

Categories voted by users:

Information

Protein name	Ctu1 protein
Main knot	4₁ (76%)
Global pLDDT	79.45
Species	Symbiodinium sp
UniProt	A0A812GAW2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	328
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.7	51-286	236	1-50, 287-328	50	42

Model Sequence

Comments

Domain	Eukaryota
Family	Symbiodiniaceae
Species (Full Name)	Symbiodinium sp. KB8
Gene	ctu1 SMICCKB8_LOCUS134
PFAM codes	PF01171
InterPro codes	IPR000541, IPR011063, IPR014729, IPR035107
PDB structures (whole Protein)	-

A0A812GAW2F1

AF4

Model Sequence

ESM1

Model Sequence