A0A812IQU5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Slc38a1 protein
Main knot	4₁ (59%)
Global pLDDT	80.02
Species	Dinoflagellate
UniProt	A0A812IQU5
Structure Prediction Model	AlphaFold v4: A0A812IQU5
PDB structures	-
Model length	308
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.8	53-307	255	1-52, 308-308	52	1

Model Sequence

MEGLRFMDFLELSESASEISEDDSIFDSDVETSDGEDFAGVPLWQTAFNIAKGIIGEGLLSLPAGLAAGTGLFSGVCIALVFYVVMTYTFWTLGRMCEATGEKSHRGLGDRVTSGVFFGNLMAVANLIQTLCCCVAYALVIGRNAEDVLAPLQANTWISSRRGSWVTILIFILLPLCLLRDLSKLAWSSFLGLLCEAFVVGFMIWRFLDGSYHPGGQFYDSQTPGTHVSWGDSGEAETWTISLSTLTLVSSMSTAFLAHYNAPKFYHQLRNRGSRRFLVATLASFTLALVLFVACMVVGYLTFGQNCS

Comments

ESM1

Categories voted by users:

Information

Protein name	Slc38a1 protein
Main knot	4₁ (54%)
Global pLDDT	83.78
Species	Dinoflagellate
UniProt	A0A812IQU5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	308
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					61.9	53-307	255	1-52, 308-308	52	1

Model Sequence

Comments

Domain	Eukaryota
Family	Symbiodiniaceae
Species (Full Name)	Symbiodinium pilosum (Dinoflagellate)
Gene	Slc38a1 SPIL2461_LOCUS908
PFAM codes	PF01490
InterPro codes	IPR013057
PDB structures (whole Protein)	-

A0A812IQU5F1

AF4

Model Sequence

ESM1

Model Sequence