A0A816V008F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (69%)
Global pLDDT
87.0
Species
Rape
UniProt
Structure Prediction Model
AlphaFold v4:  A0A816V008
PDB structures
-
Model length
337
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.0 4-227 224 1-3, 228-337 3 110
Model Sequence
MSWLPVESDPGVFTEIIQQMQVKGVQVEELYSLDITSLDEIRPVYGLVLLYKWRPEEKESRVVITEPNPNFFFASQIINNACATQALLSVLMNSSGIEIGSELSELKEFAKDFPPELKGLAISNNEAIRAAHNTFARPDSSSTTTDEDELSARRKKREEEDDDVYHYISYLPVDGILYELDGLKEGPISLGQCLGEPDGIEWLKMVQPVVQERIDRYLQNEIRFSLLAVVKNRKEMYRAELKEYQMKRERILQQVGALQADKYAEKSSYEALDKSLSEVNVGIETVSQKIVMEEERAKNWKKENLRRKHNYVPFLFNFLKILADKKKLKPLIEKARR
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (71%)
Global pLDDT
89.16
Species
Rape
UniProt
Structure Prediction Model
PDB structures
-
Model length
337
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.6 1-337 337 0 0
Model Sequence
MSWLPVESDPGVFTEIIQQMQVKGVQVEELYSLDITSLDEIRPVYGLVLLYKWRPEEKESRVVITEPNPNFFFASQIINNACATQALLSVLMNSSGIEIGSELSELKEFAKDFPPELKGLAISNNEAIRAAHNTFARPDSSSTTTDEDELSARRKKREEEDDDVYHYISYLPVDGILYELDGLKEGPISLGQCLGEPDGIEWLKMVQPVVQERIDRYLQNEIRFSLLAVVKNRKEMYRAELKEYQMKRERILQQVGALQADKYAEKSSYEALDKSLSEVNVGIETVSQKIVMEEERAKNWKKENLRRKHNYVPFLFNFLKILADKKKLKPLIEKARR
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Brassica napus (Rape)
Gene DARMORV10_A03P07670.1
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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