A0A835QSA0 | AlphaKnot 2.0

AF4

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Information

Protein name	WAT1-related protein
Main knot	5₂ (77%)
Global pLDDT	77.36
Species	Vanilla
UniProt	A0A835QSA0
Structure Prediction Model	AlphaFold v4: A0A835QSA0
PDB structures	-
Model length	340
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					80.5	40-316	277	1-39, 317-340	39	24

Model Sequence

MEGAGVGDNAWKAHAAMALVQAMMGGYHVVTKVALNVGMNQIVFCAFRDLLALSVLAPIALLHDRGRRPPVTGRLIWAFFYLGLTGIFGNQLLFLIGLSYTNPSYAAATQPAIPVFTFVFASIMGVEKLDLHTKESQLKILGTCVCISGAAVMLIYRGPALFGNGSDLAFHGDMIVGNQAEHIAWWASGFLKLGLEKRHIGVLCLMGNCLCMAAFLALQAPVLEKYPASLSLTAYTYLFGALLMFISGIFTSDSADWVLTKSEVIAILYAGILSSALSYGLITWSNKILGPALVALYNPLQPLMSSLLAAMFLGSSIFLGREDQLSRQMSSTDLLAEPLL

Comments

ESM1

Categories voted by users:

Information

Protein name	WAT1-related protein
Main knot	5₂ (65%)
Global pLDDT	86.61
Species	Vanilla
UniProt	A0A835QSA0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	340
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.5	41-321	281	1-40, 322-340	40	19

Model Sequence

Comments

Domain	Eukaryota
Family	Orchidaceae
Species (Full Name)	Vanilla planifolia (Vanilla)
Gene	HPP92_012518
PFAM codes	PF00892
InterPro codes	IPR000620, IPR030184
PDB structures (whole Protein)	-

A0A835QSA0F1

AF4

Model Sequence

ESM1

Model Sequence