A0A835VHK5F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (53%)
Global pLDDT
90.27
Species
Vanilla
UniProt
Structure Prediction Model
AlphaFold v4:  A0A835VHK5
PDB structures
-
Model length
233
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.9 12-226 215 1-11, 227-233 11 7
Model Sequence
MSASGKRWLPLEANPDVMNQFIWGLGVPEGEVEFNDVYGMDDELLEMVPKPVLAVLFLFPYSPQVENERKDVHGQGLGSVRKEIPENVYFLKQTVDNACGTIGILHAIGNLTSSIKLVEGSFFDRFYNSTANMNPFERAKFLEMDREMENAHSVAATAGDTEAKLYVEEHYCCFTSIDGQLYELDGMKPSPICHGPSSPDSLLQDAVTVIKSKIEKNPDSINFNIMALSRKGS
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (40%)
Global pLDDT
89.68
Species
Vanilla
UniProt
Structure Prediction Model
PDB structures
-
Model length
233
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.3 11-226 216 1-10, 227-233 10 7
Model Sequence
MSASGKRWLPLEANPDVMNQFIWGLGVPEGEVEFNDVYGMDDELLEMVPKPVLAVLFLFPYSPQVENERKDVHGQGLGSVRKEIPENVYFLKQTVDNACGTIGILHAIGNLTSSIKLVEGSFFDRFYNSTANMNPFERAKFLEMDREMENAHSVAATAGDTEAKLYVEEHYCCFTSIDGQLYELDGMKPSPICHGPSSPDSLLQDAVTVIKSKIEKNPDSINFNIMALSRKGS
Comments
Domain Eukaryota
Family Orchidaceae
Species (Full Name) Vanilla planifolia (Vanilla)
Gene HPP92_002099
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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