A0A838S9M6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	DUF3541 domain-containing protein
Main knot	3₁#3₁ (80%)
Global pLDDT	87.33
Species	Nitrospirales bacterium
UniProt	A0A838S9M6
Structure Prediction Model	AlphaFold v4: A0A838S9M6
PDB structures	-
Model length	337
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.0	57-312	256	1-56, 313-337	56	25

Model Sequence

MYFPIQTLQILKVGVVLGLLLSFPMASLGMTKAITTPPPVSGHELSIQSITPADVFARVQLLGKELDDIRFEMGKPKSREVGLLVEEATPHEVFFQAKTLNQKVALLVTELTEESALLGIEEDPGEIRPFHVWKMIDTSLHRILSLKQQLGLHLTNSEGLADVGTTPTQVFFIIGLANMQLNHLLMHQFSPKDVAEQVSLGIKYTAHLLRQFPTAPAPAPLPSLERGRKSWNSYDHLIDCYMVLGRIARASNIQMLNLAPQNLDRPDIQPNDVYDLATLVISELAYLHAHLPHTPPPQPVSLHGPILPSHVYQQVGGLLAQRQVLQTQVQSHPEWLQ

Comments

ESM1

Categories voted by users:

Information

Protein name	DUF3541 domain-containing protein
Main knot	3₁#3₁ (79%)
Global pLDDT	81.51
Species	Nitrospirales bacterium
UniProt	A0A838S9M6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	337
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					62.6	57-312	256	1-56, 313-337	56	25

Model Sequence

Comments

Domain	Bacteria
Family	unclassified Nitrospirales
Species (Full Name)	Nitrospirales bacterium
Gene	H0W49_04785
PDB structures (whole Protein)	-

A0A838S9M6F1

AF4

Model Sequence

ESM1

Model Sequence