A0A842XY75 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Calcium/sodium antiporter
Main knot	3₁ (75%)
Global pLDDT	91.39
Species	Candidatus Methanoperedenaceae
UniProt	A0A842XY75
Structure Prediction Model	AlphaFold v4: A0A842XY75
PDB structures	-
Model length	311
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.1	41-248	208	1-40, 249-311	40	63

Model Sequence

MENLFIQSTILVISLGILIYFSDKLIDASVKLAKAYRISDAVIGLTLLAYGTSMPELTVSSISSIGLHPELSISNVIGSNIANIALVIGLAAFVRPFSVKEKQLAKRDNYIMVASTLMLVSMFVLFQGINRIAGFLMVLFVLGYTFYAIRHDRTHLNLKKDGSVSKLKETGIVLLCLLIIVASGKFAVDSAVSVAKGLGVTEWVIGATVIAIGTTLPELAVSLTAAKKGFFGMSIGNIVGSNIFNILWVLGFASSLGTIAVDFNMIKVDSLILLFVTLLFAYQIIRVKFSRMTGILYMVIYVSYLAYLLAY

Comments

ESM1

Categories voted by users:

Information

Protein name	Calcium/sodium antiporter
Main knot	3₁ (76%)
Global pLDDT	93.43
Species	Candidatus Methanoperedenaceae
UniProt	A0A842XY75
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	311
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.0	48-248	201	1-47, 249-311	47	63

Model Sequence

Comments

Domain	Archaea
Family	Candidatus Methanoperedenaceae
Species (Full Name)	Candidatus Methanoperedenaceae archaeon
Gene	IBX39_02980
PFAM codes	PF01699
InterPro codes	IPR004481, IPR004837, IPR044880
PDB structures (whole Protein)	-

A0A842XY75F1

AF4

Model Sequence

ESM1

Model Sequence