A0A843JA87 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Conserved domain protein
Main knot	3₁ (90%)
Global pLDDT	80.5
Species	Methanomicrobium sp
UniProt	A0A843JA87
Structure Prediction Model	AlphaFold v4: A0A843JA87
PDB structures	-
Structure in AlphaLasso	A0A843JA87: L₀
Model length	323
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.3	145-295	151	1-144, 296-323	144	28

Model Sequence

MITQRAVSAVEDILKAASFDVEPGTGGASLTAYRGEECLLVLCSDNPDEINNFAVKKYKYKTDGGFAYCKKLLFTMKKVGYLEECTVWGHEELAKYAGQAVIADILGEHIALDFEYNSQTASPSGAVGAQKSGVMTLDDYGPELVCLPENITADRAQKMAGIRGEVCFVYIPHYLYTCTSRGEKQCGKYLINFDRDEKGLINAITGSKCEIESEKLENVKPETKNVSGGAKVMDAKVKKSEISESLLKSLVEDLTKNVRVNHSEGDAIYYEDLKVAPDKDNIKVELELVYLPVVQIRGDKIVEIDMMSGEILREPVDDGVELL

Comments

ESM1

Categories voted by users:

Information

Protein name	Conserved domain protein
Main knot	3₁ (83%)
Global pLDDT	84.49
Species	Methanomicrobium sp
UniProt	A0A843JA87
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A843JA87: L₀
Model length	323
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.3	145-295	151	1-144, 296-323	144	28

Model Sequence

Comments

Domain	Archaea
Family	Methanomicrobiaceae
Species (Full Name)	Methanomicrobium sp
Gene	J6X83_06325
PDB structures (whole Protein)	-

A0A843JA87F1

AF4

Model Sequence

ESM1

Model Sequence