A0A845Y0X0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	GAF domain-containing protein
Main knot	4₁ (86%)
Global pLDDT	89.17
Species	Moorena sp
UniProt	A0A845Y0X0
Structure Prediction Model	AlphaFold v4: A0A845Y0X0
PDB structures	-
Model length	397
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.7	24-271	248	1-23, 272-397	23	126

Model Sequence

MLGIDLPAQQTRLDHEPIHVIGQIQPHGGLLVLEEPELKILQVSNNTSRVLGIPAEAMLEKTLEDVLDPFQVERIKAGLSEENLDLINPTKIWARKKGDDYAVFDGVFHRNSDGCLILELEPAVSRETIPFLSFYHLARASINQLQQTSNLRDFCQIIVKEVRKVTGFDRVMLYKFEDDDHGAVIAEEKLDSLESYLGLHYPESDIPKPARRLFCSNWIRLIPDANSQPVEIFPTDNPITNRPLDLTLSILRSASPCHIKYLHNMGVGASLTISLIKDKKLWGLIACHHQTPKYVSYELRKACEFLGRVIFSEISAREETEDYDYQMKLSYIQSILIEYMSQEENFIDGLVKHDPNLLDLTSAQGAAICFGDNFTVIGETPSEEDLKFLVQWLKQNV

Comments

ESM1

Categories voted by users:

Information

Protein name	GAF domain-containing protein
Main knot	4₁ (87%)
Global pLDDT	89.74
Species	Moorena sp
UniProt	A0A845Y0X0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	397
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.1	24-297	274	1-23, 298-397	23	100

Model Sequence

Comments

Domain	Bacteria
Family	Oscillatoriaceae
Species (Full Name)	Moorena sp. SIO3B2
Gene	F6K38_36240
PFAM codes	PF00360, PF01590, PF08446
InterPro codes	IPR001294, IPR003018, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR043150
PDB structures (whole Protein)	-

A0A845Y0X0F1

AF4

Model Sequence

ESM1

Model Sequence