A0A845YAE2F1

PAS domain S-box protein
AF6
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
84 (92%)
Global pLDDT
79.72
Species
Symploca sp
UniProt
Structure Prediction Model
AlphaFold v6:  A0A845YAE2
PDB structures
-
Model length
999
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.33 337-691 355 1-336, 692-999 336 308 Knot
Model Sequence
MNSNIPSLSVADILLVDDQPENLRLLTTMLGERGYKVRKAINGTLALNAVDLNKPDLILLDIKMPELDGYEVCQRLKASELTADIPVIFMSALEEVWDKVKAFEIGGVDYISKPFQVQEVLARIENQLTIYRQKTQLEQQQKQLASQNSQLQLLLTTTKAIHEAADFHSALEATLCQVCEKIGWDFGEVWIPNEENTVLEYGPGWYARNKYFEQFRHKSELLKFSTHKGILKHIWLSKQPYWFPDVSVESCQVFLRSQLAKEVGLKACFGVPIIFNEQVLAILVFLKREASPAKGRLIELVSALASQLSSLIGRKRSESALRESQQQLAAMAANIPGTVYRGVVRTDGKMSFLYISEGERELSGLAPQEIIAEPERYLQAIHPEDRADFEETLRTSVTTLKPSNHEYRIVATSGEVKWVRDSIRYSHLDNGDVIVDGVALDISDRRKSEERLRLLDRAIAASSNGIVITDPLQPDNPIIYVNSGFEQITGYSAKEFIGSNCRFLQASETNQPALERLRTALQEQRECHVTLRNYRRDGTLFWNELSVSPIRDTSGQLTHYIGIQTDITELQQAKAALLESEARYRVAAEGSLDAFFILQSLRDAQGNIVDFTFIDVNSRGEQMIALSKEEIIGEKLCELLPINRTGGFLPKYIHVVETKEVLEEEFSIVTPEVTIEWLHHMVVPLADGIAITTKNITKRKQAEAALQKLSEQEREKAQQLEKTLKKLQDTQAQLVQQENMASLGHLVAGVAHEINNPISFIYGNIYPASEYIQDLLHLLQLYQRHYPEPVPEITEELNNIELDFIIEDFPKLLTSMREGANRISEIVLSLKNFSNSEKKERKRADIHQGIDNTLLLLQHRFKHALGDTEIELIKEYGDLPPVECYPSQLNQVFMNIIGNGIDALESDNRTLQGKITISTKTLDPDRVAIRIANNGQGMTPEIRDRIFDPFFSTKPVGSGTGLGLAVSYQIVVGKHKGILTCLSEPEMGTEFWIELPINQ
Comments
AF4
Categories voted by users:
Information
Protein name
PAS domain S-box protein
Main knot
84 (95%)
Global pLDDT
80.03
Species
Symploca sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A845YAE2
PDB structures
-
Model length
999
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.3 335-693 359 1-334, 694-999 334 306
Model Sequence
MNSNIPSLSVADILLVDDQPENLRLLTTMLGERGYKVRKAINGTLALNAVDLNKPDLILLDIKMPELDGYEVCQRLKASELTADIPVIFMSALEEVWDKVKAFEIGGVDYISKPFQVQEVLARIENQLTIYRQKTQLEQQQKQLASQNSQLQLLLTTTKAIHEAADFHSALEATLCQVCEKIGWDFGEVWIPNEENTVLEYGPGWYARNKYFEQFRHKSELLKFSTHKGILKHIWLSKQPYWFPDVSVESCQVFLRSQLAKEVGLKACFGVPIIFNEQVLAILVFLKREASPAKGRLIELVSALASQLSSLIGRKRSESALRESQQQLAAMAANIPGTVYRGVVRTDGKMSFLYISEGERELSGLAPQEIIAEPERYLQAIHPEDRADFEETLRTSVTTLKPSNHEYRIVATSGEVKWVRDSIRYSHLDNGDVIVDGVALDISDRRKSEERLRLLDRAIAASSNGIVITDPLQPDNPIIYVNSGFEQITGYSAKEFIGSNCRFLQASETNQPALERLRTALQEQRECHVTLRNYRRDGTLFWNELSVSPIRDTSGQLTHYIGIQTDITELQQAKAALLESEARYRVAAEGSLDAFFILQSLRDAQGNIVDFTFIDVNSRGEQMIALSKEEIIGEKLCELLPINRTGGFLPKYIHVVETKEVLEEEFSIVTPEVTIEWLHHMVVPLADGIAITTKNITKRKQAEAALQKLSEQEREKAQQLEKTLKKLQDTQAQLVQQENMASLGHLVAGVAHEINNPISFIYGNIYPASEYIQDLLHLLQLYQRHYPEPVPEITEELNNIELDFIIEDFPKLLTSMREGANRISEIVLSLKNFSNSEKKERKRADIHQGIDNTLLLLQHRFKHALGDTEIELIKEYGDLPPVECYPSQLNQVFMNIIGNGIDALESDNRTLQGKITISTKTLDPDRVAIRIANNGQGMTPEIRDRIFDPFFSTKPVGSGTGLGLAVSYQIVVGKHKGILTCLSEPEMGTEFWIELPINQ
Comments
Domain Bacteria
Family Microcoleaceae
Species (Full Name) Symploca sp. SIO2G7
Gene F6K31_12460
PFAM codes  PF00072,  PF00512,  PF02518,  PF08447,  PF13185,  PF13426
InterPro codes  IPR000014,  IPR000700,  IPR001610,  IPR001789,  IPR003018,  IPR003594,  IPR003661,  IPR004358,  IPR005467,  IPR011006,  IPR013655,  IPR029016,  IPR035965,  IPR036097,  IPR036890
PDB structures (whole Protein) -
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