| Protein name |
DUF4239 domain-containing protein
|
| Main knot |
41 (90%)
|
| Global pLDDT |
75.78
|
| Species |
Nitrosarchaeum sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A846SSD1
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A846SSD1: L0
|
| Model length |
315
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
57.7 | 151-275 | 125 | 1-150, 276-315 | 150 | 40 |
|
Model Sequence |
MKTAEGTSSLVTIILAIATLIVISGFAYFFFQGVTKSIDDTDCAAQIQTHATILRLGRTIFLPIDCPTTEHIYTRPGSSDQIKKDIADEMAACWKRWGRGEGELFSDEGMYCNYCSYIDFTATGEDVTGISSYLSTTPYKDTGETYMHYLQPTFTEEARNLLASETKRIEHSGSQETYTHNQPYAILFAYAKGDNHIRKFSTYFTWSSGFAKASNTASLALGAVAGGATGAFAITVLGIGTGGTALIVIGTAGAVAVGLDVFLSAFDPEDYTEHASTVVLMPLSEEHLKQLGCTHSWATRERPEGFYTHHTQTQP
|
| Protein name |
DUF4239 domain-containing protein
|
| Main knot |
01 (98%)
|
| Species |
Nitrosarchaeum sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A846SSD1: L0
|
| Model length |
315
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MKTAEGTSSLVTIILAIATLIVISGFAYFFFQGVTKSIDDTDCAAQIQTHATILRLGRTIFLPIDCPTTEHIYTRPGSSDQIKKDIADEMAACWKRWGRGEGELFSDEGMYCNYCSYIDFTATGEDVTGISSYLSTTPYKDTGETYMHYLQPTFTEEARNLLASETKRIEHSGSQETYTHNQPYAILFAYAKGDNHIRKFSTYFTWSSGFAKASNTASLALGAVAGGATGAFAITVLGIGTGGTALIVIGTAGAVAVGLDVFLSAFDPEDYTEHASTVVLMPLSEEHLKQLGCTHSWATRERPEGFYTHHTQTQP
|
| Domain |
Archaea
|
| Family |
Nitrosopumilaceae
|
| Species (Full Name) |
Nitrosarchaeum sp
|
| Gene |
HC945_00555
|
| PDB structures (whole Protein) |
-
|
A0A846SSD1