A0A852EK60 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (64%)
Global pLDDT	80.48
Species	Pin-tailed whydah
UniProt	A0A852EK60
Structure Prediction Model	AlphaFold v4: A0A852EK60
PDB structures	-
Model length	308
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.8	61-290	230	1-60, 291-308	60	18

Model Sequence

MAERTDYTKSQISLAEYSPVNKSERTKRDPRGAQDGDQNTMQLKKEISLINGISLIVGNMIGSGIFVSPKGVLIYSRSYGLSLIIWAVGGIFSVFGALCYAELGTTITKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIVQPFFPSCDPPYVACRLIAAACECLLTFINCAYVKWGTRVQDVFTYAKVAALIAIIIAGLVKICQGHIWHFKNSFEGSSSDIGEISLALYSALFSYSGWDTLNYVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNIAYYTVLDAHAVLSSDAVAV

Comments

ESM1

Categories voted by users:

Information

Protein name	YLAT2 protein
Main knot	4₁ (59%)
Global pLDDT	90.97
Species	Pin-tailed whydah
UniProt	A0A852EK60
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	308
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.9	61-290	230	1-60, 291-308	60	18

Model Sequence

Comments

Domain	Eukaryota
Family	Estrildidae
Species (Full Name)	Vidua macroura (Pin-tailed whydah)
Gene	Slc7a6_1 VIDMAC_R04660
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A852EK60F1

AF4

Model Sequence

ESM1

Model Sequence